Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5064 family protein | CD58_RS06485 | Not Available | Negative | 1495498 - 1495857 | 13657.1 |
| carbamate kinase | CD58_RS06490 | Not Available | Negative | 1495922 - 1496851 | 32768.5 |
| ornithine carbamoyltransferase | CD58_RS06495 | Not Available | Negative | 1497017 - 1498027 | 37832.3 |
| arginine deiminase | CD58_RS06500 | Not Available | Negative | 1498099 - 1499355 | 46353.5 |
| arginine-ornithine antiporter | CD58_RS06505 | Not Available | Negative | 1499389 - 1500816 | 51030.8 |
| arginine-ornithine antiporter | CD58_RS06510 | Not Available | Positive | 1501200 - 1502627 | 50672.2 |
| coa transferase | CD58_RS06515 | Not Available | Negative | 1502846 - 1504192 | 48242.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | CD58_RS06520 | Not Available | Negative | 1504447 - 1505448 | 36262.2 |
| phosphogluconate dehydratase | CD58_RS06525 | Not Available | Positive | 1505667 - 1507493 | 65235.7 |
| glucokinase | CD58_RS06530 | Not Available | Positive | 1507490 - 1508449 | 33701.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
