Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity branched-chain amino acid abc transporter permease livh | CD58_RS06435 | Not Available | Negative | 1482567 - 1483490 | 32334.6 |
| branched-chain amino acid abc transporter substrate-binding protein | CD58_RS06440 | Not Available | Negative | 1483720 - 1484847 | 39648.3 |
| duf2288 domain-containing protein | CD58_RS06445 | Not Available | Positive | 1485188 - 1485493 | 11148.3 |
| hypothetical protein | CD58_RS06450 | Not Available | Negative | 1485779 - 1487956 | 82041.4 |
| spinster family mfs transporter | CD58_RS06455 | Not Available | Positive | 1488307 - 1489659 | 48772.8 |
| is256 family transposase | CD58_RS06460 | Not Available | Positive | 1489834 - 1491084 | 46841.4 |
| mdr family mfs transporter | CD58_RS06465 | Not Available | Negative | 1491235 - 1492752 | 53691.9 |
| 4-hydroxybenzoate 3-monooxygenase | CD58_RS06470 | Not Available | Negative | 1492822 - 1494012 | 44464.3 |
| helix-turn-helix domain-containing protein | CD58_RS06475 | Not Available | Positive | 1494188 - 1495081 | 34004.9 |
| hypothetical protein | CD58_RS31190 | Not Available | Negative | 1495089 - 1495265 | 6634.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
