Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cog3650 family protein | CD58_RS06385 | Not Available | Negative | 1474668 - 1475339 | 24095.6 |
| short chain dehydrogenase | CD58_RS06390 | Not Available | Negative | 1475400 - 1475999 | 21078.4 |
| lysr family transcriptional regulator | CD58_RS06395 | Not Available | Positive | 1476104 - 1477018 | 34255.4 |
| doxx family protein | CD58_RS06400 | Not Available | Negative | 1477140 - 1477619 | 17484.7 |
| duf2063 domain-containing protein | CD58_RS06405 | Not Available | Negative | 1477616 - 1478374 | 27286.6 |
| duf692 domain-containing protein | CD58_RS06410 | Not Available | Negative | 1478371 - 1479240 | 32029.1 |
| duf2282 domain-containing protein | CD58_RS06415 | Not Available | Negative | 1479266 - 1479571 | 10186.2 |
| abc transporter atp-binding protein | CD58_RS06420 | Not Available | Negative | 1479848 - 1480549 | 25628.3 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | CD58_RS06425 | Not Available | Negative | 1480550 - 1481317 | 28391.7 |
| high-affinity branched-chain amino acid abc transporter permease livm | CD58_RS06430 | Not Available | Negative | 1481314 - 1482570 | 45572.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
