Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copd family protein | CD58_RS06340 | Not Available | Negative | 1462383 - 1462847 | 16979.8 |
| atp-dependent dna helicase ding | CD58_RS06345 | Not Available | Positive | 1462947 - 1465091 | 78842.2 |
| esta family serine hydrolase | CD58_RS06350 | Not Available | Positive | 1465363 - 1466508 | 41218.0 |
| ompa family protein | CD58_RS06355 | Not Available | Positive | 1466628 - 1467740 | 38814.6 |
| pyridoxamine 5'-phosphate oxidase | CD58_RS06360 | Not Available | Positive | 1467765 - 1468412 | 24584.1 |
| metal abc transporter atp-binding protein | CD58_RS29020 | Not Available | Negative | 1468360 - 1468643 | 10784.1 |
| glycine zipper 2tm domain-containing protein | CD58_RS06365 | Not Available | Positive | 1468813 - 1469277 | 15885.1 |
| na+/h+ antiporter nhaa | CD58_RS06370 | Not Available | Negative | 1470263 - 1471450 | 41079.9 |
| plp-dependent cysteine synthase family protein | CD58_RS06375 | Not Available | Positive | 1471717 - 1472811 | 40096.7 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS06380 | Not Available | Negative | 1472935 - 1474548 | 58462.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
