Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ligase-associated dna damage response endonuclease pdem | CD58_RS06240 | Not Available | Negative | 1441707 - 1442363 | 23945.9 |
| ligase-associated dna damage response dexh box helicase | CD58_RS06245 | Not Available | Negative | 1442363 - 1444849 | 91646.7 |
| abc transporter atp-binding protein | CD58_RS06250 | Not Available | Negative | 1445070 - 1445834 | 28186.2 |
| succinylglutamate desuccinylase/aspartoacylase family protein | CD58_RS06255 | Not Available | Negative | 1445848 - 1446966 | 40970.3 |
| abc transporter permease | CD58_RS06260 | Not Available | Negative | 1446993 - 1447703 | 26525.7 |
| abc transporter permease | CD58_RS06265 | Not Available | Negative | 1447700 - 1448428 | 26921.7 |
| transporter substrate-binding domain-containing protein | CD58_RS06270 | Not Available | Negative | 1448486 - 1449268 | 27906.4 |
| acyltransferase family protein | CD58_RS06275 | Not Available | Negative | 1449598 - 1450746 | 42903.0 |
| atp-dependent dna ligase | CD58_RS06280 | Not Available | Negative | 1451291 - 1452982 | 62959.5 |
| ligase-associated dna damage response exonuclease | CD58_RS06285 | Not Available | Negative | 1452979 - 1454010 | 37777.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
