Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 1432626 - 1432702 | Not Available |
| dna polymerase iv | CD58_RS06195 | Not Available | Positive | 1432985 - 1434046 | 39365.2 |
| hypothetical protein | CD58_RS06200 | Not Available | Negative | 1434102 - 1435055 | 35471.6 |
| proline--trna ligase | CD58_RS06205 | Not Available | Negative | 1435073 - 1436788 | 63181.8 |
| ampg family muropeptide mfs transporter | CD58_RS06210 | Not Available | Negative | 1436918 - 1438477 | 56651.5 |
| mgmt family protein | CD58_RS06215 | Not Available | Negative | 1438522 - 1438875 | 12638.1 |
| duf481 domain-containing protein | CD58_RS06220 | Not Available | Positive | 1439031 - 1440038 | 38122.5 |
| cold-shock protein | CD58_RS06225 | Not Available | Negative | 1440234 - 1440443 | 7727.11 |
| dctp deaminase | CD58_RS06230 | Not Available | Positive | 1440798 - 1441364 | 21281.3 |
| hypothetical protein | CD58_RS06235 | Not Available | Positive | 1441464 - 1441679 | 7437.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
