Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin-nadp reductase | CD58_RS06140 | Not Available | Positive | 1420516 - 1421295 | 29751.7 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | CD58_RS06145 | Not Available | Negative | 1421490 - 1422188 | 25724.2 |
| duf1456 family protein | CD58_RS06150 | Not Available | Negative | 1422428 - 1422889 | 17369.3 |
| rrna pseudouridine synthase | CD58_RS06155 | Not Available | Negative | 1422947 - 1423657 | 26127.8 |
| gnat family n-acetyltransferase | CD58_RS06160 | Not Available | Negative | 1423740 - 1424213 | 18113.9 |
| 30s ribosomal protein s12 methylthiotransferase rimo | CD58_RS06165 | Not Available | Negative | 1424472 - 1425812 | 49579.3 |
| potassium transporter kup | CD58_RS06170 | Not Available | Positive | 1426088 - 1427989 | 68414.0 |
| virulence factor family protein | CD58_RS06175 | Not Available | Negative | 1428247 - 1429536 | 46836.7 |
| bifunctional lysylphosphatidylglycerol flippase/synthetase mprf | CD58_RS06180 | Not Available | Negative | 1429536 - 1432178 | 96757.8 |
| Trna-met | Not Available | Not Available | Positive | 1432330 - 1432406 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
