Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(13) synthase trud | CD58_RS05945 | Not Available | Positive | 1388000 - 1389058 | 38778.2 |
| 5'/3'-nucleotidase sure | CD58_RS05950 | Not Available | Positive | 1389046 - 1389795 | 26706.7 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | CD58_RS05955 | Not Available | Positive | 1389837 - 1390472 | 23550.7 |
| peptidoglycan dd-metalloendopeptidase family protein | CD58_RS05960 | Not Available | Positive | 1390699 - 1391547 | 29874.7 |
| rna polymerase sigma factor rpos | CD58_RS05965 | Not Available | Positive | 1391654 - 1392661 | 38192.6 |
| ferredoxin fdxa | CD58_RS05970 | Not Available | Negative | 1393173 - 1393496 | 11933.1 |
| pp_01236 | CD58_RS06120 | Not Available | Positive | 1417406 - 1418152 | Not Available |
| response regulator transcription factor erdr | CD58_RS06125 | Not Available | Positive | 1418367 - 1419020 | 23516.5 |
| diacylglycerol kinase | CD58_RS06130 | Not Available | Positive | 1419093 - 1419455 | 12801.1 |
| lysr family transcriptional regulator | CD58_RS06135 | Not Available | Negative | 1419468 - 1420394 | 34218.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
