Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna lysidine(34) synthetase tils | CD58_RS05895 | Not Available | Positive | 1377609 - 1378910 | 47693.2 |
| ctp synthase | CD58_RS05900 | Not Available | Positive | 1379209 - 1380840 | 59551.3 |
| 3-deoxy-8-phosphooctulonate synthase | CD58_RS05905 | Not Available | Positive | 1380845 - 1381690 | 30678.3 |
| phosphopyruvate hydratase | CD58_RS05910 | Not Available | Positive | 1381895 - 1383184 | 45548.1 |
| cell division protein ftsb | CD58_RS05915 | Not Available | Positive | 1383356 - 1383634 | 10478.7 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | CD58_RS05920 | Not Available | Positive | 1383631 - 1384338 | 26024.0 |
| lysr substrate-binding domain-containing protein | CD58_RS05925 | Not Available | Negative | 1384515 - 1385411 | 33982.8 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | CD58_RS05930 | Not Available | Positive | 1385520 - 1386632 | 39135.6 |
| s-formylglutathione hydrolase | CD58_RS05935 | Not Available | Positive | 1386641 - 1387486 | 31368.1 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | CD58_RS05940 | Not Available | Positive | 1387530 - 1388003 | 16852.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
