Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2782 domain-containing protein | CD58_RS00180 | Not Available | Negative | 38382 - 38669 | 10689.8 |
| dna polymerase i | CD58_RS00185 | Not Available | Positive | 38744 - 41512 | 100449.0 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | CD58_RS00190 | Not Available | Negative | 41888 - 42529 | 23716.8 |
| c-type cytochrome | CD58_RS00195 | Not Available | Positive | 42721 - 43011 | 10642.9 |
| c-type cytochrome | CD58_RS00200 | Not Available | Positive | 43058 - 43669 | 20995.9 |
| thiol:disulfide interchange protein dsba/dsbl | CD58_RS00205 | Not Available | Positive | 43866 - 44510 | 23313.3 |
| endonuclease/exonuclease/phosphatase family protein | CD58_RS00210 | Not Available | Positive | 44525 - 45403 | 32365.2 |
| ggdef domain-containing protein | CD58_RS00215 | Not Available | Positive | 45400 - 47544 | 78310.8 |
| n-acetylmuramoyl-l-alanine amidase | CD58_RS00220 | Not Available | Positive | 47648 - 48427 | 28754.1 |
| eal domain-containing protein | CD58_RS00225 | Not Available | Positive | 48503 - 50116 | 59985.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
