Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma e protease regulator rsep | CD58_RS05845 | Not Available | Positive | 1364071 - 1365423 | 48217.1 |
| outer membrane protein assembly factor bama | CD58_RS05850 | Not Available | Positive | 1365498 - 1367885 | 87619.9 |
| omph family outer membrane protein | CD58_RS05855 | Not Available | Positive | 1367931 - 1368434 | 18757.0 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | CD58_RS05860 | Not Available | Positive | 1368438 - 1369493 | 36377.7 |
| 3-hydroxyacyl-acp dehydratase fabz | CD58_RS05865 | Not Available | Positive | 1369596 - 1370036 | 16659.5 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | CD58_RS05870 | Not Available | Positive | 1370033 - 1370809 | 27981.4 |
| lipid-a-disaccharide synthase | CD58_RS05875 | Not Available | Positive | 1370809 - 1371942 | 41308.9 |
| ribonuclease hii | CD58_RS05880 | Not Available | Positive | 1371939 - 1372598 | 23774.1 |
| dna polymerase iii subunit alpha | CD58_RS05885 | Not Available | Positive | 1372840 - 1376361 | 131364.0 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | CD58_RS05890 | Not Available | Positive | 1376511 - 1377458 | 35042.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
