Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyldiaminopimelate transaminase | CD58_RS05795 | Not Available | Negative | 1352638 - 1353837 | 44067.8 |
| [protein-pii] uridylyltransferase | CD58_RS05800 | Not Available | Negative | 1353975 - 1356677 | 103434.0 |
| type i methionyl aminopeptidase | CD58_RS05805 | Not Available | Negative | 1356722 - 1357504 | 28869.8 |
| 30s ribosomal protein s2 | CD58_RS05810 | Not Available | Positive | 1357953 - 1358690 | 27061.8 |
| translation elongation factor ts | CD58_RS05815 | Not Available | Positive | 1358882 - 1359745 | 30395.7 |
| ump kinase | CD58_RS05820 | Not Available | Positive | 1359959 - 1360702 | 26606.5 |
| ribosome recycling factor | CD58_RS05825 | Not Available | Positive | 1360699 - 1361256 | 20577.7 |
| polyprenyl diphosphate synthase | CD58_RS05830 | Not Available | Positive | 1361270 - 1362025 | 28060.6 |
| phosphatidate cytidylyltransferase | CD58_RS05835 | Not Available | Positive | 1362025 - 1362831 | 28785.2 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | CD58_RS05840 | Not Available | Positive | 1362828 - 1364018 | 42596.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
