Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | CD58_RS05745 | Not Available | Negative | 1341979 - 1343130 | 41335.2 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | CD58_RS05750 | Not Available | Positive | 1343522 - 1344340 | 29222.4 |
| sufe family protein | CD58_RS05755 | Not Available | Negative | 1344467 - 1344874 | 15159.0 |
| aminotransferase class v-fold plp-dependent enzyme | CD58_RS05760 | Not Available | Negative | 1344871 - 1346076 | 43292.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | CD58_RS05765 | Not Available | Negative | 1346203 - 1347237 | 36075.4 |
| arsenate reductase | CD58_RS05770 | Not Available | Negative | 1347270 - 1347578 | 11937.3 |
| na+/h+ antiporter | CD58_RS05775 | Not Available | Positive | 1347934 - 1349580 | 60034.9 |
| short chain dehydrogenase | CD58_RS05780 | Not Available | Negative | 1349792 - 1350400 | 21118.3 |
| lysr family transcriptional regulator | CD58_RS05785 | Not Available | Positive | 1350509 - 1351423 | 33791.9 |
| duf6124 family protein | CD58_RS05790 | Not Available | Positive | 1352028 - 1352387 | 12828.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
