Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter atp-binding protein | CD58_RS05695 | Not Available | Negative | 1330801 - 1331435 | 22805.4 |
| efflux rnd transporter periplasmic adaptor subunit | CD58_RS05700 | Not Available | Positive | 1331530 - 1332630 | 39811.6 |
| efflux rnd transporter permease subunit | CD58_RS05705 | Not Available | Positive | 1332637 - 1335702 | 112705.0 |
| duf4197 domain-containing protein | CD58_RS05710 | Not Available | Negative | 1335834 - 1336523 | 23969.0 |
| ybay family lipoprotein | CD58_RS05715 | Not Available | Negative | 1336557 - 1336952 | 14009.0 |
| hypothetical protein | CD58_RS05720 | Not Available | Negative | 1337080 - 1337415 | 12071.2 |
| glycerol-3-phosphate 1-o-acyltransferase plsb | CD58_RS05725 | Not Available | Negative | 1337603 - 1340101 | 94519.9 |
| cold shock domain-containing protein | CD58_RS05730 | Not Available | Positive | 1340328 - 1340537 | 7614.89 |
| hypothetical protein | CD58_RS05735 | Not Available | Negative | 1340710 - 1341087 | 14054.4 |
| putative rna methyltransferase | CD58_RS05740 | Not Available | Negative | 1341170 - 1341979 | 29783.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
