Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS05645 | Not Available | Negative | 1321137 - 1321481 | 12851.2 |
| phosphoenolpyruvate carboxylase | CD58_RS05650 | Not Available | Positive | 1321699 - 1324329 | 97448.9 |
| adenylate kinase | CD58_RS05655 | Not Available | Positive | 1324620 - 1325270 | 23239.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | CD58_RS05660 | Not Available | Positive | 1325365 - 1326042 | 23866.6 |
| hypothetical protein | CD58_RS05665 | Not Available | Positive | 1326412 - 1326720 | 11306.3 |
| duf72 domain-containing protein | CD58_RS05670 | Not Available | Positive | 1326720 - 1327580 | 32504.9 |
| oxaloacetate decarboxylase | CD58_RS05675 | Not Available | Positive | 1327613 - 1328434 | 28871.3 |
| extensin family protein | CD58_RS05680 | Not Available | Positive | 1328451 - 1329149 | 25473.6 |
| hypothetical protein | CD58_RS05685 | Not Available | Negative | 1329163 - 1329783 | 22896.2 |
| class i sam-dependent methyltransferase | CD58_RS05690 | Not Available | Positive | 1329892 - 1330674 | 28098.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
