Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 2 | CD58_RS05600 | Not Available | Positive | 1312465 - 1313560 | 40956.9 |
| lysine--trna ligase | CD58_RS05605 | Not Available | Positive | 1313669 - 1315171 | 56954.1 |
| tetr/acrr family transcriptional regulator | CD58_RS05610 | Not Available | Positive | 1315285 - 1315989 | 26003.1 |
| hypothetical protein | CD58_RS05615 | Not Available | Positive | 1316155 - 1316709 | 20573.5 |
| flavohemoglobin expression-modulating qegla motif protein | CD58_RS05620 | Not Available | Positive | 1316746 - 1318023 | 48250.1 |
| metal abc transporter atp-binding protein | CD58_RS31370 | Not Available | Negative | 1318037 - 1318147 | 3602.31 |
| alpha/beta hydrolase | CD58_RS05625 | Not Available | Positive | 1318173 - 1319078 | 33385.3 |
| hypothetical protein | CD58_RS05630 | Not Available | Positive | 1319075 - 1319404 | 12113.9 |
| ompa family protein | CD58_RS05635 | Not Available | Negative | 1319597 - 1320385 | 28526.6 |
| duf4398 domain-containing protein | CD58_RS05640 | Not Available | Negative | 1320437 - 1320850 | 14623.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
