Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:flavin oxidoreductase/nadh oxidase | CD58_RS05495 | Not Available | Positive | 1289843 - 1290949 | 40490.8 |
| glucan biosynthesis protein d | CD58_RS05500 | Not Available | Negative | 1291136 - 1292761 | 60995.9 |
| hypothetical protein | CD58_RS05510 | Not Available | Positive | 1293125 - 1293310 | 7200.97 |
| abrb/maze/spovt family dna-binding domain-containing protein | CD58_RS05515 | Not Available | Positive | 1293496 - 1293741 | 8822.78 |
| type ii toxin-antitoxin system vapc family toxin | CD58_RS05520 | Not Available | Positive | 1293741 - 1294142 | 14924.1 |
| gamma-aminobutyraldehyde dehydrogenase | CD58_RS05525 | Not Available | Negative | 1294197 - 1295621 | 50825.8 |
| abc transporter permease | CD58_RS05530 | Not Available | Negative | 1295789 - 1296607 | 29491.8 |
| abc transporter permease | CD58_RS05535 | Not Available | Negative | 1296597 - 1297544 | 34425.1 |
| abc transporter atp-binding protein | CD58_RS05540 | Not Available | Negative | 1297546 - 1298583 | 38281.9 |
| putative abc transporter substrate-binding protein ydcs | CD58_RS05545 | Not Available | Negative | 1298816 - 1299967 | 42172.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
