Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l19 | CD58_RS05445 | Not Available | Positive | 1278031 - 1278381 | 12969.9 |
| site-specific tyrosine recombinase xerd | CD58_RS05450 | Not Available | Positive | 1278514 - 1279410 | 33901.2 |
| dsbc family protein | CD58_RS05455 | Not Available | Positive | 1279711 - 1280442 | 26054.6 |
| homoserine dehydrogenase | CD58_RS05460 | Not Available | Positive | 1280579 - 1281883 | 46354.1 |
| threonine synthase | CD58_RS05465 | Not Available | Positive | 1281988 - 1283397 | 51777.1 |
| transporter substrate-binding domain-containing protein | CD58_RS05470 | Not Available | Positive | 1283518 - 1284888 | 51805.9 |
| duf3509 domain-containing protein | CD58_RS05475 | Not Available | Positive | 1285075 - 1285362 | 10371.8 |
| caib/baif coa transferase family protein | CD58_RS05480 | Not Available | Negative | 1285714 - 1286913 | 43292.4 |
| yaeq family protein | CD58_RS05485 | Not Available | Positive | 1287061 - 1287603 | 20821.8 |
| single-stranded-dna-specific exonuclease recj | CD58_RS05490 | Not Available | Positive | 1287773 - 1289482 | 62145.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
