Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metq/nlpa family abc transporter substrate-binding protein | CD58_RS00130 | Not Available | Negative | 28327 - 29100 | 27725.5 |
| methionine abc transporter permease | CD58_RS00135 | Not Available | Negative | 29180 - 29854 | 24059.5 |
| methionine abc transporter atp-binding protein | CD58_RS00140 | Not Available | Negative | 29854 - 30861 | 36622.2 |
| catalase hpii | CD58_RS00145 | Not Available | Positive | 31124 - 33262 | 78494.0 |
| pa5502 family lipoprotein | CD58_RS00150 | Not Available | Negative | 33411 - 34124 | 25652.8 |
| zinc abc transporter permease subunit znub | CD58_RS00155 | Not Available | Negative | 34162 - 34950 | 27341.0 |
| zinc abc transporter atp-binding protein znuc | CD58_RS00160 | Not Available | Negative | 34943 - 35725 | 28102.1 |
| zinc uptake transcriptional repressor zur | CD58_RS00165 | Not Available | Negative | 35725 - 36207 | 17391.9 |
| zinc abc transporter substrate-binding protein znua | CD58_RS00170 | Not Available | Positive | 36274 - 37203 | 33483.1 |
| homoserine kinase | CD58_RS00175 | Not Available | Negative | 37372 - 38322 | 34935.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
