Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system trehalose-specific eiibc component | CD58_RS05345 | Not Available | Positive | 1254942 - 1256384 | 51188.1 |
| alpha,alpha-phosphotrehalase | CD58_RS05350 | Not Available | Positive | 1256457 - 1258100 | 64032.3 |
| maltoporin | CD58_RS05355 | Not Available | Positive | 1258243 - 1259466 | 45184.4 |
| phosphoenolpyruvate--protein phosphotransferase | CD58_RS05360 | Not Available | Positive | 1259538 - 1262072 | 89287.3 |
| pts transporter subunit eiib | CD58_RS05365 | Not Available | Positive | 1262075 - 1262362 | 10102.3 |
| duf6632 domain-containing protein | CD58_RS05370 | Not Available | Positive | 1262472 - 1262864 | 14264.9 |
| multicopper oxidase family protein | CD58_RS05375 | Not Available | Positive | 1263061 - 1264437 | 50517.6 |
| trna adenosine(34) deaminase tada | CD58_RS05380 | Not Available | Positive | 1264437 - 1264934 | 17762.4 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | CD58_RS05385 | Not Available | Negative | 1265139 - 1266095 | 36103.3 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | CD58_RS05390 | Not Available | Negative | 1266092 - 1266835 | 27294.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
