Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | CD58_RS05300 | Not Available | Negative | 1243391 - 1245070 | 61820.2 |
| peptidoglycan dd-metalloendopeptidase family protein | CD58_RS05305 | Not Available | Negative | 1245534 - 1246355 | 29434.7 |
| exodeoxyribonuclease vii large subunit | CD58_RS05310 | Not Available | Negative | 1246359 - 1247738 | 51060.1 |
| sulfite exporter taue/safe family protein | CD58_RS05315 | Not Available | Positive | 1247968 - 1248735 | 27597.4 |
| hypothetical protein | CD58_RS05320 | Not Available | Positive | 1248802 - 1249350 | 20451.5 |
| imp dehydrogenase | CD58_RS05325 | Not Available | Positive | 1249644 - 1251113 | 51992.8 |
| glutamine-hydrolyzing gmp synthase | CD58_RS05330 | Not Available | Positive | 1251193 - 1252770 | 58385.3 |
| hypothetical protein | CD58_RS29005 | Not Available | Positive | 1253150 - 1253425 | 10505.3 |
| helix-turn-helix transcriptional regulator | CD58_RS05335 | Not Available | Positive | 1253430 - 1253954 | 18419.2 |
| trehalose operon repressor | CD58_RS05340 | Not Available | Negative | 1253994 - 1254698 | 26683.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
