Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus biogenesis/stability protein pilw | CD58_RS05250 | Not Available | Positive | 1232809 - 1233567 | 28829.4 |
| helix-turn-helix domain-containing protein | CD58_RS05255 | Not Available | Positive | 1233567 - 1234559 | 34263.3 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | CD58_RS05260 | Not Available | Positive | 1234563 - 1235672 | 39760.1 |
| histidine--trna ligase | CD58_RS05265 | Not Available | Positive | 1235695 - 1236984 | 47916.5 |
| yfgm family protein | CD58_RS05270 | Not Available | Positive | 1237025 - 1237666 | 22756.9 |
| outer membrane protein assembly factor bamb | CD58_RS05275 | Not Available | Positive | 1237659 - 1238810 | 40772.4 |
| ribosome biogenesis gtpase der | CD58_RS05280 | Not Available | Positive | 1239011 - 1240483 | 54799.9 |
| pyridoxal phosphate-dependent aminotransferase | CD58_RS05285 | Not Available | Positive | 1240766 - 1241914 | 42314.5 |
| amidohydrolase | CD58_RS05290 | Not Available | Positive | 1241902 - 1242693 | 29639.1 |
| hypothetical protein | CD58_RS05295 | Not Available | Positive | 1242761 - 1243183 | 14580.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
