Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly transcriptional regulator iscr | CD58_RS05200 | Not Available | Positive | 1225564 - 1226055 | 17880.3 |
| iscs subfamily cysteine desulfurase | CD58_RS05205 | Not Available | Positive | 1226106 - 1227320 | 44638.3 |
| fe-s cluster assembly scaffold iscu | CD58_RS05210 | Not Available | Positive | 1227363 - 1227749 | 13870.7 |
| iron-sulfur cluster assembly protein isca | CD58_RS05215 | Not Available | Positive | 1227775 - 1228098 | 11598.6 |
| co-chaperone hscb | CD58_RS05220 | Not Available | Positive | 1228107 - 1228628 | 20136.7 |
| fe-s protein assembly chaperone hsca | CD58_RS05225 | Not Available | Positive | 1228679 - 1230541 | 66196.4 |
| isc system 2fe-2s type ferredoxin | CD58_RS05230 | Not Available | Positive | 1230545 - 1230886 | 12477.7 |
| fe-s cluster assembly protein iscx | CD58_RS05235 | Not Available | Positive | 1230901 - 1231101 | 7536.94 |
| nucleoside-diphosphate kinase | CD58_RS05240 | Not Available | Positive | 1231194 - 1231619 | 15054.8 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | CD58_RS05245 | Not Available | Positive | 1231648 - 1232796 | 42215.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
