Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 1216143 - 1216227 | Not Available |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | CD58_RS05155 | Not Available | Positive | 1216336 - 1217385 | 38294.9 |
| trna guanosine(34) transglycosylase tgt | CD58_RS05160 | Not Available | Positive | 1217400 - 1218515 | 41068.8 |
| preprotein translocase subunit yajc | CD58_RS05165 | Not Available | Positive | 1218559 - 1218897 | 11924.7 |
| protein translocase subunit secd | CD58_RS05170 | Not Available | Positive | 1218963 - 1220831 | 67233.4 |
| protein translocase subunit secf | CD58_RS05175 | Not Available | Positive | 1220841 - 1221755 | 32953.2 |
| glycine zipper 2tm domain-containing protein | CD58_RS05180 | Not Available | Positive | 1221873 - 1222421 | 18896.7 |
| inositol-phosphate phosphatase | CD58_RS05185 | Not Available | Negative | 1222784 - 1223602 | 29733.5 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | CD58_RS05190 | Not Available | Positive | 1223747 - 1224517 | 28434.3 |
| serine o-acetyltransferase | CD58_RS05195 | Not Available | Positive | 1224519 - 1225295 | 27911.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
