Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | CD58_RS05105 | Not Available | Positive | 1207216 - 1207782 | 20785.8 |
| duf6124 family protein | CD58_RS05110 | Not Available | Positive | 1208283 - 1208642 | 12999.4 |
| ktsc domain-containing protein | CD58_RS05115 | Not Available | Negative | 1208885 - 1209085 | 7528.12 |
| hypothetical protein | CD58_RS05120 | Not Available | Positive | 1209230 - 1209997 | 29707.9 |
| smi1/knr4 family protein | CD58_RS28995 | Not Available | Negative | 1210914 - 1211312 | 14230.8 |
| hypothetical protein | CD58_RS05125 | Not Available | Positive | 1212024 - 1212554 | 19459.6 |
| hypothetical protein | CD58_RS28740 | Not Available | Negative | 1213241 - 1214578 | 49187.9 |
| hypothetical protein | CD58_RS05135 | Not Available | Negative | 1214686 - 1215180 | 18421.2 |
| hypothetical protein | CD58_RS05140 | Not Available | Negative | 1215182 - 1215475 | 10919.9 |
| hypothetical protein | CD58_RS05145 | Not Available | Negative | 1215525 - 1215854 | 11861.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
