Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4256 domain-containing protein | CD58_RS05060 | Not Available | Positive | 1193465 - 1194010 | 20102.8 |
| hypothetical protein | CD58_RS05065 | Not Available | Negative | 1194207 - 1195715 | 57718.7 |
| helix-turn-helix domain-containing protein | CD58_RS05070 | Not Available | Positive | 1196188 - 1196991 | 29456.6 |
| hybrid sensor histidine kinase/response regulator | CD58_RS05075 | Not Available | Positive | 1196991 - 1199378 | 88828.8 |
| tonb-dependent receptor | CD58_RS05080 | Not Available | Positive | 1199380 - 1201731 | 86701.0 |
| sensor domain-containing diguanylate cyclase | CD58_RS05085 | Not Available | Negative | 1201715 - 1202800 | 40120.2 |
| sialidase family protein | CD58_RS30015 | Not Available | Positive | 1203336 - 1204829 | 55842.1 |
| rho-binding antiterminator | CD58_RS05090 | Not Available | Negative | 1205014 - 1205280 | 10094.0 |
| dihydrodipicolinate synthase family protein | CD58_RS05095 | Not Available | Negative | 1205376 - 1206263 | 31608.3 |
| aldolase | CD58_RS05100 | Not Available | Negative | 1206283 - 1207065 | 28678.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
