Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | CD58_RS05015 | Not Available | Positive | 1186611 - 1187339 | 27617.5 |
| acyl-homoserine-lactone synthase | CD58_RS05020 | Not Available | Negative | 1187309 - 1187992 | 25558.6 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | CD58_RS05025 | Not Available | Positive | 1188226 - 1189401 | 44406.6 |
| duf6190 family protein | CD58_RS05030 | Not Available | Positive | 1189394 - 1189912 | 19762.9 |
| dihydrodipicolinate synthase family protein | CD58_RS05035 | Not Available | Positive | 1189902 - 1190705 | 29731.5 |
| iron-containing redox enzyme family protein | CD58_RS05040 | Not Available | Positive | 1190702 - 1191559 | 32632.5 |
| rieske (2fe-2s) protein | CD58_RS05045 | Not Available | Positive | 1191612 - 1191779 | 6137.44 |
| metal abc transporter atp-binding protein | CD58_RS30005 | Not Available | Positive | 1192060 - 1192140 | 2860.59 |
| voc family protein | CD58_RS05050 | Not Available | Negative | 1192180 - 1192596 | 15170.4 |
| gnat family n-acetyltransferase | CD58_RS05055 | Not Available | Negative | 1192828 - 1193340 | 19203.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
