Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CD58_RS04965 | Not Available | Positive | 1176136 - 1177044 | 31911.8 |
| abc transporter atp-binding protein | CD58_RS04970 | Not Available | Positive | 1177055 - 1177894 | 30995.9 |
| abc transporter atp-binding protein | CD58_RS04975 | Not Available | Positive | 1177905 - 1178672 | 27947.8 |
| oligogalacturonate-specific porin kdgm family protein | CD58_RS04980 | Not Available | Positive | 1178805 - 1179527 | 28012.5 |
| fadr/gntr family transcriptional regulator | CD58_RS04985 | Not Available | Negative | 1179652 - 1180395 | 27179.7 |
| fadr/gntr family transcriptional regulator | CD58_RS04990 | Not Available | Positive | 1180492 - 1181205 | 25864.1 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | CD58_RS04995 | Not Available | Negative | 1181259 - 1183928 | 99462.1 |
| marr family winged helix-turn-helix transcriptional regulator | CD58_RS05000 | Not Available | Positive | 1184102 - 1184554 | 16905.0 |
| transketolase-like tk c-terminal-containing protein | CD58_RS05005 | Not Available | Negative | 1184565 - 1185665 | 39599.3 |
| glutathione s-transferase family protein | CD58_RS05010 | Not Available | Positive | 1185761 - 1186399 | 23700.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
