Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | CD58_RS00080 | Not Available | Positive | 18883 - 19236 | 12892.0 |
| duf6124 family protein | CD58_RS00085 | Not Available | Positive | 19919 - 20269 | 12847.2 |
| sdr family nad(p)-dependent oxidoreductase | CD58_RS00090 | Not Available | Positive | 20530 - 21318 | 27980.2 |
| metal abc transporter atp-binding protein | CD58_RS00095 | Not Available | Negative | 21564 - 22019 | 16326.8 |
| organic hydroperoxide resistance protein | CD58_RS00100 | Not Available | Negative | 22146 - 22565 | 14173.8 |
| sensor domain-containing diguanylate cyclase | CD58_RS00105 | Not Available | Negative | 22969 - 24093 | 41437.2 |
| lysozyme inhibitor lpri family protein | CD58_RS00110 | Not Available | Negative | 24290 - 24664 | 13653.4 |
| hypothetical protein | CD58_RS00115 | Not Available | Negative | 24792 - 25349 | 20096.9 |
| duf6124 family protein | CD58_RS00120 | Not Available | Positive | 25894 - 26253 | 13093.4 |
| hypothetical protein | CD58_RS00125 | Not Available | Negative | 26447 - 26998 | 20903.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
