Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aminotransferase family protein | CD58_RS04725 | Not Available | Positive | 1126546 - 1127934 | 50831.2 |
| yebg family protein | CD58_RS04730 | Not Available | Negative | 1128012 - 1128272 | 9756.59 |
| phosphate-starvation-inducible protein psie | CD58_RS04735 | Not Available | Positive | 1128531 - 1129031 | 18513.9 |
| duf3509 domain-containing protein | CD58_RS04740 | Not Available | Negative | 1129028 - 1129345 | 11307.8 |
| hpf/raia family ribosome-associated protein | CD58_RS04745 | Not Available | Positive | 1129852 - 1130262 | 15350.0 |
| helix-turn-helix domain-containing protein | CD58_RS04750 | Not Available | Negative | 1130367 - 1131242 | 32468.7 |
| dmt family transporter | CD58_RS04755 | Not Available | Positive | 1131379 - 1132281 | 32335.9 |
| 2-hydroxyacid dehydrogenase | CD58_RS04760 | Not Available | Negative | 1132468 - 1133439 | 35346.6 |
| ykgj family cysteine cluster protein | CD58_RS04765 | Not Available | Negative | 1133653 - 1134402 | 27347.7 |
| hypothetical protein | CD58_RS04770 | Not Available | Negative | 1134481 - 1134807 | 11746.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
