Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1302 domain-containing protein | CD58_RS04675 | Not Available | Positive | 1112562 - 1114355 | 63921.5 |
| duf1329 domain-containing protein | CD58_RS04680 | Not Available | Positive | 1114378 - 1115745 | 50855.1 |
| helix-turn-helix transcriptional regulator | CD58_RS04685 | Not Available | Positive | 1115928 - 1118480 | 95466.3 |
| iclr family transcriptional regulator | CD58_RS04690 | Not Available | Negative | 1118512 - 1119333 | 29134.8 |
| homogentisate 1,2-dioxygenase | CD58_RS04695 | Not Available | Positive | 1119497 - 1120801 | 48064.3 |
| fumarylacetoacetase | CD58_RS04700 | Not Available | Positive | 1120805 - 1122109 | 47120.3 |
| maleylacetoacetate isomerase | CD58_RS04705 | Not Available | Positive | 1122120 - 1122755 | 23229.7 |
| sirb1 family protein | CD58_RS04710 | Not Available | Negative | 1122918 - 1123721 | 30109.6 |
| glu/leu/phe/val dehydrogenase family protein | CD58_RS04715 | Not Available | Positive | 1123908 - 1124927 | 35474.7 |
| benzoate/h(+) symporter bene family transporter | CD58_RS04720 | Not Available | Negative | 1124997 - 1126202 | 41923.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
