Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing protein | CD58_RS04630 | Not Available | Negative | 1104241 - 1104717 | 17745.9 |
| flavodoxin | CD58_RS04635 | Not Available | Positive | 1104874 - 1105326 | 16066.2 |
| class ii aldolase/adducin family protein | CD58_RS04640 | Not Available | Positive | 1105492 - 1106274 | 27962.6 |
| alpha/beta fold hydrolase | CD58_RS04645 | Not Available | Positive | 1106274 - 1107176 | 34269.7 |
| sdr family oxidoreductase | CD58_RS04650 | Not Available | Positive | 1107519 - 1108430 | 32710.8 |
| n-acetylmuramoyl-l-alanine amidase | CD58_RS04655 | Not Available | Negative | 1108473 - 1109240 | 28247.2 |
| is256 family transposase | CD58_RS04660 | Not Available | Negative | 1109557 - 1110807 | 46841.4 |
| atp-grasp domain-containing protein | CD58_RS04665 | Not Available | Negative | 1110972 - 1111754 | 29372.8 |
| bacteriocin immunity protein | CD58_RS31585 | Not Available | Negative | 1111878 - 1111979 | 3787.45 |
| hypothetical protein | CD58_RS31105 | Not Available | Negative | 1112174 - 1112347 | 6017.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
