Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate transporter cysz | CD58_RS04580 | Not Available | Negative | 1096206 - 1096961 | 28140.4 |
| thioredoxin-disulfide reductase | CD58_RS04585 | Not Available | Positive | 1097272 - 1098234 | 33953.4 |
| aspartate aminotransferase family protein | CD58_RS04590 | Not Available | Negative | 1098414 - 1099664 | 44309.6 |
| hopj type iii effector protein | CD58_RS04595 | Not Available | Negative | 1099965 - 1100303 | 11999.1 |
| duf1244 domain-containing protein | CD58_RS04600 | Not Available | Negative | 1100296 - 1100592 | 11183.1 |
| dihydroneopterin triphosphate 2'-epimerase | CD58_RS04605 | Not Available | Negative | 1100692 - 1101072 | 14199.2 |
| gtp cyclohydrolase i fole | CD58_RS04610 | Not Available | Negative | 1101073 - 1101633 | 20828.4 |
| dihydromonapterin reductase | CD58_RS04615 | Not Available | Negative | 1101654 - 1102364 | 25278.4 |
| merr family transcriptional regulator | CD58_RS04620 | Not Available | Positive | 1102600 - 1103559 | 35647.4 |
| hypothetical protein | CD58_RS04625 | Not Available | Negative | 1103581 - 1104186 | 23434.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
