Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nif3-like dinuclear metal center hexameric protein | CD58_RS04530 | Not Available | Positive | 1084912 - 1085670 | 27522.0 |
| sulfate adenylyltransferase subunit cysd | CD58_RS04535 | Not Available | Positive | 1085920 - 1086837 | 35306.3 |
| sulfate adenylyltransferase subunit cysn | CD58_RS04540 | Not Available | Positive | 1086847 - 1088745 | 69202.7 |
| acyltransferase | CD58_RS04545 | Not Available | Negative | 1088920 - 1089828 | 35293.1 |
| phosphate acetyltransferase | CD58_RS04550 | Not Available | Negative | 1089829 - 1091928 | 75318.3 |
| duf3565 domain-containing protein | CD58_RS04555 | Not Available | Negative | 1092021 - 1092359 | 12652.7 |
| peptidylprolyl isomerase | CD58_RS04560 | Not Available | Positive | 1092328 - 1092813 | 17130.9 |
| glutathione peroxidase | CD58_RS04565 | Not Available | Positive | 1092928 - 1093410 | 17544.0 |
| nadh:flavin oxidoreductase | CD58_RS04570 | Not Available | Positive | 1093725 - 1094828 | 40196.0 |
| glycosyltransferase family 4 protein | CD58_RS04575 | Not Available | Negative | 1094966 - 1096165 | 44379.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
