Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome hibernation-promoting factor, hpf/yfia family | CD58_RS04430 | Not Available | Negative | 1066816 - 1067124 | 11576.0 |
| rna polymerase factor sigma-54 | CD58_RS04435 | Not Available | Negative | 1067201 - 1068694 | 56533.9 |
| lps export abc transporter atp-binding protein | CD58_RS04440 | Not Available | Negative | 1068860 - 1069585 | 26469.1 |
| lipopolysaccharide transport periplasmic protein lpta | CD58_RS04445 | Not Available | Negative | 1069585 - 1070133 | 19558.3 |
| lps export abc transporter periplasmic protein lptc | CD58_RS04450 | Not Available | Negative | 1070120 - 1070689 | 21246.2 |
| kdsc family phosphatase | CD58_RS04455 | Not Available | Negative | 1070697 - 1071221 | 18897.9 |
| kpsf/gutq family sugar-phosphate isomerase | CD58_RS04460 | Not Available | Negative | 1071222 - 1072196 | 34410.0 |
| atp-binding cassette domain-containing protein | CD58_RS04465 | Not Available | Positive | 1072472 - 1073281 | 29471.9 |
| lipid asymmetry maintenance abc transporter permease subunit mlae | CD58_RS04470 | Not Available | Positive | 1073281 - 1074078 | 28389.1 |
| outer membrane lipid asymmetry maintenance protein mlad | CD58_RS04475 | Not Available | Positive | 1074078 - 1074545 | 16528.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
