Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | CD58_RS00030 | Not Available | Negative | 8176 - 8910 | 28300.6 |
| pas domain-containing sensor histidine kinase | CD58_RS00035 | Not Available | Positive | 9133 - 10647 | 56068.2 |
| lysophospholipid acyltransferase family protein | CD58_RS00040 | Not Available | Negative | 10827 - 11597 | 28754.1 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | CD58_RS00045 | Not Available | Negative | 11677 - 12210 | 18941.9 |
| glycine--trna ligase subunit beta | CD58_RS00050 | Not Available | Negative | 12214 - 14268 | 74788.5 |
| glycine--trna ligase subunit alpha | CD58_RS00055 | Not Available | Negative | 14265 - 15218 | 36249.0 |
| dna-3-methyladenine glycosylase i | CD58_RS00060 | Not Available | Positive | 15300 - 15857 | 21049.5 |
| lysophospholipid acyltransferase | CD58_RS00065 | Not Available | Positive | 15901 - 16788 | 32652.0 |
| hypothetical protein | CD58_RS00070 | Not Available | Positive | 16922 - 17647 | 25850.1 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS00075 | Not Available | Positive | 17782 - 18828 | 36335.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
