Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspj | BK654_02080 | Not Available | Negative | 494840 - 495451 | 22286.6 |
| type ii secretion system protein gsph | BK654_02085 | Not Available | Negative | 495448 - 495897 | 16576.1 |
| general secretion pathway protein gspc | BK654_02090 | Not Available | Positive | 496015 - 496446 | 15026.2 |
| type ii secretion system protein gspi | BK654_02095 | Not Available | Negative | 496459 - 496839 | 13807.1 |
| type ii secretion system protein gspg | BK654_02100 | Not Available | Positive | 496989 - 497432 | 16064.3 |
| hxcx atypical pseudopilin | BK654_02105 | Not Available | Positive | 497441 - 498424 | 35893.2 |
| type ii secretion system protein gspl | BK654_02110 | Not Available | Positive | 498421 - 499599 | 41977.6 |
| general secretion pathway protein gspm | BK654_02115 | Not Available | Positive | 499592 - 500137 | 19225.9 |
| type ii secretion system protein gspd | BK654_02120 | Not Available | Positive | 500134 - 502488 | 82905.6 |
| type ii secretion system protein gspe | BK654_02125 | Not Available | Positive | 502685 - 504103 | 51570.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
