Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylglycerophosphatase a | BK654_13985 | Not Available | Positive | 3219045 - 3219548 | 19327.8 |
| abc transporter substrate-binding protein | BK654_13990 | Not Available | Positive | 3219560 - 3220318 | 28653.3 |
| gtp cyclohydrolase ii | BK654_13995 | Not Available | Positive | 3220412 - 3221029 | 22449.1 |
| mfs transporter | BK654_14000 | Not Available | Positive | 3221026 - 3221445 | 15279.3 |
| cobalamin-binding protein | BK654_14005 | Not Available | Positive | 3221445 - 3222242 | 28823.2 |
| tonb-dependent receptor | BK654_14010 | Not Available | Negative | 3222370 - 3224250 | 70211.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | BK654_14015 | Not Available | Negative | 3224397 - 3226295 | 68483.7 |
| geranyl transferase | BK654_14020 | Not Available | Negative | 3226410 - 3227297 | 31278.3 |
| exodeoxyribonuclease vii small subunit | BK654_14025 | Not Available | Negative | 3227294 - 3227536 | 8906.36 |
| cell filamentation protein fic | BK654_14030 | Not Available | Negative | 3227769 - 3228905 | 42542.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
