Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | BK654_09470 | Not Available | Negative | 2192648 - 2193571 | 35535.7 |
| glucose-1-phosphate thymidylyltransferase | BK654_09475 | Not Available | Negative | 2193627 - 2194517 | 32853.5 |
| dtdp-4-dehydrorhamnose reductase | BK654_09480 | Not Available | Negative | 2194514 - 2195407 | 32486.1 |
| dtdp-glucose 4,6-dehydratase | BK654_09485 | Not Available | Negative | 2195404 - 2196537 | 42577.9 |
| hypothetical protein | BK654_09490 | Not Available | Negative | 2196688 - 2196927 | 8733.34 |
| integration host factor subunit beta | BK654_09495 | Not Available | Negative | 2196952 - 2197245 | 10885.1 |
| hypothetical protein | BK654_09500 | Not Available | Negative | 2197392 - 2197670 | 9969.21 |
| 30s ribosomal protein s1 | BK654_09505 | Not Available | Negative | 2197882 - 2199573 | 62320.9 |
| cytidylate kinase | BK654_09510 | Not Available | Negative | 2199694 - 2200383 | 24471.4 |
| bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase | BK654_09515 | Not Available | Negative | 2200380 - 2202587 | 77950.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
