Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | BK654_09115 | Not Available | Negative | 2116990 - 2117472 | 17271.5 |
| aaa family atpase | BK654_09120 | Not Available | Negative | 2117469 - 2118359 | 33710.1 |
| hybrid sensor histidine kinase/response regulator | BK654_09125 | Not Available | Positive | 2118523 - 2120844 | 85064.6 |
| marr family transcriptional regulator | BK654_09130 | Not Available | Negative | 2120828 - 2121289 | 17179.9 |
| glutathione peroxidase | BK654_09135 | Not Available | Negative | 2121286 - 2121771 | 17553.3 |
| peptide-methionine (r)-s-oxide reductase | BK654_09140 | Not Available | Negative | 2122038 - 2122433 | 14704.5 |
| aminotransferase | BK654_09145 | Not Available | Positive | 2122654 - 2123865 | 44861.2 |
| zinc metalloprotease htpx | BK654_09150 | Not Available | Positive | 2124168 - 2125055 | 32432.9 |
| thiopurine s-methyltransferase | BK654_09155 | Not Available | Negative | 2126040 - 2126693 | 24562.6 |
| dioxygenase | BK654_09160 | Not Available | Positive | 2126797 - 2127564 | 27849.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
