Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate transporter | BK654_08815 | Not Available | Positive | 2042167 - 2043378 | 44109.5 |
| response regulator | BK654_08820 | Not Available | Positive | 2043393 - 2043968 | 21562.6 |
| mfs transporter | BK654_08825 | Not Available | Positive | 2044372 - 2045583 | 42638.9 |
| protein kinase | BK654_08830 | Not Available | Positive | 2045593 - 2047263 | 61601.7 |
| nitrite reductase large subunit | BK654_08835 | Not Available | Positive | 2047690 - 2050143 | 89774.1 |
| nitrite reductase | BK654_08840 | Not Available | Positive | 2050140 - 2050457 | 11473.7 |
| nitrate reductase | BK654_08845 | Not Available | Positive | 2050457 - 2053174 | 98903.5 |
| uroporphyrinogen-iii c-methyltransferase | BK654_08850 | Not Available | Positive | 2053186 - 2053941 | 26191.8 |
| porin | BK654_08855 | Not Available | Negative | 2054141 - 2055175 | 36617.0 |
| rna polymerase subunit sigma | BK654_08860 | Not Available | Negative | 2055283 - 2055873 | 23242.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
