Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c oxidase, cbb3-type subunit ii | BK654_08610 | Not Available | Positive | 1991598 - 1992206 | 22593.3 |
| cytochrome-c oxidase | BK654_08615 | Not Available | Positive | 1992210 - 1992413 | 7348.98 |
| cytochrome-c oxidase, cbb3-type subunit iii | BK654_08620 | Not Available | Positive | 1992410 - 1993363 | 34001.5 |
| cytochrome-c oxidase, cbb3-type subunit i | BK654_08625 | Not Available | Positive | 1993846 - 1995288 | 53382.6 |
| cytochrome-c oxidase, cbb3-type subunit ii | BK654_08630 | Not Available | Positive | 1995288 - 1995896 | 22516.2 |
| cbb3-type cytochrome c oxidase subunit 3 | BK654_08635 | Not Available | Positive | 1995901 - 1996086 | 6763.24 |
| cytochrome-c oxidase, cbb3-type subunit iii | BK654_08640 | Not Available | Positive | 1996083 - 1997066 | 35300.9 |
| prevent-host-death protein | BK654_08645 | Not Available | Positive | 1997216 - 1997470 | 9178.97 |
| vapc toxin family pin domain ribonuclease | BK654_08650 | Not Available | Positive | 1997470 - 1997880 | 14973.0 |
| cytochrome c oxidase accessory protein ccog | BK654_08655 | Not Available | Positive | 1998182 - 1999597 | 53575.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
