Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i glyceraldehyde-3-phosphate dehydrogenase | BK654_08460 | Not Available | Negative | 1951206 - 1952669 | 53284.7 |
| transcription-repair coupling factor | BK654_08465 | Not Available | Positive | 1952838 - 1956287 | 128386.0 |
| hypothetical protein | BK654_08470 | Not Available | Positive | 1956298 - 1956864 | 20652.7 |
| helicase | BK654_08475 | Not Available | Positive | 1956876 - 1959569 | 101997.0 |
| methylthioadenosine phosphorylase | BK654_08480 | Not Available | Negative | 1959610 - 1960353 | 26349.5 |
| beta-n-acetylhexosaminidase | BK654_08485 | Not Available | Negative | 1960365 - 1961375 | 36250.6 |
| tetr family transcriptional regulator | BK654_08490 | Not Available | Negative | 1961547 - 1962254 | 26068.0 |
| repressor lexa | BK654_08495 | Not Available | Positive | 1962496 - 1963104 | 22258.0 |
| cdp-glycerol--udp-pyrophosphoryl-n- acetylglucosaminyl-n-acetylmannosamine glycerophosphotransferase | BK654_08500 | Not Available | Positive | 1963115 - 1963588 | 17319.9 |
| hypothetical protein | BK654_08505 | Not Available | Positive | 1963665 - 1963880 | 8273.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
