Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | BK654_08260 | Not Available | Negative | 1912681 - 1913994 | 49100.3 |
| dna-binding response regulator | BK654_08265 | Not Available | Negative | 1913991 - 1914659 | 24779.8 |
| peptidase | BK654_08270 | Not Available | Negative | 1914659 - 1914970 | 11652.1 |
| peptidase | BK654_08275 | Not Available | Negative | 1914970 - 1915278 | 11413.4 |
| hypothetical protein | BK654_08280 | Not Available | Positive | 1915504 - 1916583 | 39511.9 |
| 6-carboxytetrahydropterin synthase qued | BK654_08285 | Not Available | Positive | 1916667 - 1917023 | 13625.3 |
| alpha/beta hydrolase | BK654_08290 | Not Available | Positive | 1917203 - 1918033 | 31118.9 |
| cytosine permease | BK654_08295 | Not Available | Positive | 1918312 - 1919583 | 45032.2 |
| cytosine deaminase | BK654_08300 | Not Available | Positive | 1919596 - 1920843 | 46041.1 |
| nickel/cobalt efflux protein rcna | BK654_08305 | Not Available | Negative | 1921023 - 1921847 | 29629.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
