Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit b | BK654_08210 | Not Available | Negative | 1901538 - 1903553 | 75987.0 |
| aromatic amino acid aminotransferase | BK654_08215 | Not Available | Positive | 1903886 - 1905082 | 43333.6 |
| hypothetical protein | BK654_08220 | Not Available | Negative | 1905145 - 1905372 | 7912.3 |
| Trna-asn | Not Available | Not Available | Positive | 1905606 - 1905681 | Not Available |
| hypothetical protein | BK654_08230 | Not Available | Positive | 1905927 - 1906121 | 7263.93 |
| hypothetical protein | BK654_08235 | Not Available | Positive | 1906210 - 1906392 | 6282.81 |
| ai-2e family transporter | BK654_08240 | Not Available | Negative | 1906389 - 1907450 | 39072.4 |
| u32 family peptidase | BK654_08245 | Not Available | Positive | 1907597 - 1908922 | 49502.3 |
| chemotaxis protein | BK654_08250 | Not Available | Negative | 1909193 - 1910872 | 59459.8 |
| sodium:proton antiporter | BK654_08255 | Not Available | Negative | 1911113 - 1912432 | 45699.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
