Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_08010 | Not Available | Negative | 1863764 - 1864408 | 22477.2 |
| hypothetical protein | BK654_08015 | Not Available | Negative | 1864644 - 1865189 | 19364.9 |
| hypothetical protein | BK654_08020 | Not Available | Positive | 1865830 - 1866069 | 8640.43 |
| hypothetical protein | BK654_08025 | Not Available | Positive | 1866238 - 1867491 | 47699.5 |
| hypothetical protein | BK654_08030 | Not Available | Negative | 1867650 - 1868051 | 14693.4 |
| Trna-val | Not Available | Not Available | Positive | 1869029 - 1869105 | Not Available |
| gamma-glutamylputrescine oxidoreductase | BK654_08040 | Not Available | Positive | 1869290 - 1870573 | 46608.0 |
| plasmid stabilization protein | BK654_08045 | Not Available | Negative | 1870610 - 1870885 | 10790.0 |
| copg family transcriptional regulator | BK654_08050 | Not Available | Negative | 1870885 - 1871157 | 10125.9 |
| Trna-asp | Not Available | Not Available | Positive | 1871439 - 1871515 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
