Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | BK654_07605 | Not Available | Negative | 1779051 - 1780070 | 36600.2 |
| abc transporter permease | BK654_07610 | Not Available | Negative | 1780074 - 1781051 | 33581.7 |
| sugar abc transporter atp-binding protein | BK654_07615 | Not Available | Negative | 1781048 - 1782601 | 55603.3 |
| laci family transcriptional regulator | BK654_07620 | Not Available | Negative | 1782659 - 1783615 | 33462.7 |
| hypothetical protein | BK654_07625 | Not Available | Negative | 1783751 - 1784203 | 15283.8 |
| hypothetical protein | BK654_07630 | Not Available | Positive | 1784409 - 1784708 | 11101.2 |
| deoxyribonuclease | BK654_07635 | Not Available | Positive | 1784714 - 1785403 | 26204.4 |
| penicillin-binding protein activator lpob | BK654_07640 | Not Available | Negative | 1785559 - 1785924 | 13079.7 |
| carbon storage regulator | BK654_07645 | Not Available | Positive | 1786173 - 1786367 | 6949.5 |
| hypothetical protein | BK654_07650 | Not Available | Negative | 1786566 - 1787021 | 16225.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
