Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination factor protein rara | BK654_07055 | Not Available | Negative | 1652144 - 1653469 | 49032.4 |
| outer membrane lipoprotein carrier protein lola | BK654_07060 | Not Available | Negative | 1653639 - 1654262 | 22847.6 |
| cell division protein ftsk | BK654_07065 | Not Available | Negative | 1654320 - 1656725 | 87831.0 |
| leucyl/phenylalanyl-trna--protein transferase | BK654_07070 | Not Available | Positive | 1657157 - 1657837 | 25448.4 |
| arginyltransferase | BK654_07075 | Not Available | Positive | 1657895 - 1658602 | 27864.4 |
| translation initiation factor if-1 | BK654_07080 | Not Available | Positive | 1658703 - 1658921 | 8303.06 |
| atp-dependent clp protease atp-binding subunit clpa | BK654_07085 | Not Available | Negative | 1659159 - 1661429 | 83393.9 |
| atp-dependent clp protease adapter clps | BK654_07090 | Not Available | Negative | 1661459 - 1661821 | 13579.2 |
| cold-shock protein | BK654_07095 | Not Available | Positive | 1662048 - 1662317 | 9699.54 |
| nadp-dependent isocitrate dehydrogenase | BK654_07100 | Not Available | Negative | 1662396 - 1663652 | 45436.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
