Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carnitine dehydratase | BK659_19980 | Not Available | Positive | 4492380 - 4493561 | 42396.2 |
| sprt family protein | BK659_19985 | Not Available | Negative | 4493681 - 4494175 | 19491.5 |
| hypothetical protein | BK659_19990 | Not Available | Negative | 4494392 - 4494994 | 21681.9 |
| trna 2-thiocytidine(32) synthetase ttca | BK659_19995 | Not Available | Positive | 4495326 - 4496150 | 31199.8 |
| 3-methyladenine dna glycosylase | BK659_20000 | Not Available | Positive | 4496306 - 4496977 | 25472.0 |
| hypothetical protein | BK659_20005 | Not Available | Negative | 4497090 - 4497515 | 15764.0 |
| nad(p)h:quinone oxidoreductase, type iv | BK659_20010 | Not Available | Negative | 4497517 - 4498113 | 20818.1 |
| arsenate reductase (glutaredoxin) | BK659_20015 | Not Available | Negative | 4498110 - 4498463 | 12781.6 |
| peroxiredoxin | BK659_20020 | Not Available | Positive | 4498581 - 4499048 | 16999.4 |
| meta domain-containing protein | BK659_20025 | Not Available | Negative | 4499231 - 4499635 | 15183.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
