Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| topoisomerase ii | BK659_19780 | Not Available | Positive | 4451719 - 4452006 | 10597.4 |
| succinylglutamate desuccinylase | BK659_19785 | Not Available | Positive | 4452019 - 4453029 | 37774.4 |
| 6,7-dimethyl-8-ribityllumazine synthase | BK659_19790 | Not Available | Negative | 4453183 - 4453692 | 18909.7 |
| threonine aldolase | BK659_19795 | Not Available | Positive | 4454200 - 4455204 | 35892.2 |
| alanine--trna ligase | BK659_19800 | Not Available | Positive | 4455351 - 4457972 | 94492.9 |
| aspartate kinase | BK659_19805 | Not Available | Positive | 4458062 - 4459303 | 44522.6 |
| carbon storage regulator | BK659_19810 | Not Available | Positive | 4459490 - 4459678 | 6939.5 |
| Trna-ser | Not Available | Not Available | Positive | 4459741 - 4459831 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 4459940 - 4460016 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 4460089 - 4460165 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
